Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790184.1_cds_XP_016500413.1_1352
CDS Infomation

[gene=LOC107818840] [db_xref=GeneID:107818840] [protein=disease resistance protein At4g27190-like isoform X5] [protein_id=XP_016500413.1] [location=4072..6186] [gbkey=CDS]
Sequence

ATGAGAACAGACGCCGAAATCAAGGTGTACACATTTGACGAGGATGAATCTTGGCAACTG
TTTGTCAAAAATGCAAGAGATAATGCCAATCTGGAGCATATTCAACCATTTGCAAAGAAA
ATTGCAAAGCAGTGTGATGGATTACCTTTAGCAATCACTGTTATCGCAGCCTCTATGAGA
GGGCAGGAAAGGGTCGAGCTATGGAAAGGTACTTTGGAATCACTTAGAATGTCCAAACCT
AATAAAGATTTTGAAAATATGGTTTACAAGGTCATCAAGTGGAGTTTTGATTCTTTAGAA
TCTCAGGGTATTGAATTGTCCTCAGAGCAAACAAGCAAACATGTGAACAAAAGGGGAGGT
GACATTCAAAATTGTTTCTTGTATTGCTCTTTATATCCAGTGGCTGTTTCAACAGATGAT
CTCATACATTGTTGGTGGACAGAGGGGCTCCTTGGTGAACATGACACATACGAAGAAGCC
TACAACAGGGGAATCACAGTGATTGAGAGTTTAAAAGATGCCTGCTTGCTGGAAACCCAT
GGGGGGTTGGATTCGGTTAAGATGCATGCCATGGTTCGTAATGTTGCTATATGGATAGCT
AATTCATTAGGGGATGAACACAATTCTCTTATTCAAGCTGGAATTGGGTTGACTCATATT
AAAATTATGTCAGTTTCTGTCAAGAGAATATCTTTCGTAAGCAACAAAATTGAACGCCTA
CCTGATTCTTTCAAGAAATGCCCAAAAACAACAACTTTACTTCTGCAAGATAATAGTCCC
CTTCAGATAATTCCGCATGAACTTTTTCAGGCATTTCCAGCCCTAAGAGTTCTGAATCTG
AGTGGAACTGGTATTAGAGCACTGCCTTCTTCCATCAATAGTTTATCTCAATTAAATGCT
CTAATACTGCAAAATTGCGGCTGGCTGACAGAGTTACCACCTATTGGTGATCTTTGCAAT
TTGCAATTGCTCGATTGTGATAATACAAAATTAAATTGTCTACCGCAGGGATTGGACAAG
TTGACAAATCTGAGGCTATTAAATATGCCTGCAACATATTTGAAGAGCATCGGCCAAGGA
ATTCTTCCCAAATTGTCTAGCATTGAAATGTTAAATATGTTGGATACCACATACTTTCAG
CCGCCTAGATGGTACCTAACCCCGCATCCTTATCCGGGCACTTTGAGCAATGTAAGAAAG
GAGGGGGACACTCTTCTTGGATCATCTACTTTTGATGAGCTATCATATCTACCCAATCTG
ACTTCTCTTTTTGTTAAATTGGATAGCTCATCAATTTTGAATAGAGACCACACCTGGATG
TCTAGATTGGAAAGATTTCGCATAGAAGTTGGGGTAGGTCCAATGGAAGCAAAATTCAAC
AAGTCAACAAGGATGATTGGCGTGTCGCAGTGTCAAATTTTCAGTAAGGGAGAGCTCTCA
GGCATGTTGCAGTTTGCTTCAGATTTATACTTGATAAAATGCATGGGTCTCAGGAAGTTG
ATTGCATACAACAGTTTTGATGGACTAAAATCACTACACATTGTGAACTGTTCATGTGAT
TTTAAACCAGTGGAAGAAGGGAATGAACATTTTGACCCTCTGCCCAATCTGAAAGAAGGA
AATGAACATTTTGACCCTCTGCCCAATCTGGAATATCTCCGCCTCGGCTCCTTATTTAAT
TTAAAGAGTGTTTCTGAGTTTGGTCATTTTCTGGGTACAAGATTTTCTAAATTACGCCAA
CTAGAGATGGCCGTTTGTCAAAGCTTAACATGTCTTTTTAACGTTGGTGGAGCTTTTTCT
GTACCGAAGCACCTGGAAGATATTGGAATTTCCAATTGTCGGATGACACTTGTCAACTCA
GAAGTTCCAAGAGTTCGGGAGTTACTGTTGGAAAACTGTCCAAGCTTAGGAACACTGGGC
GAGCCAGAGAATACGTGGGAACACCTGGAGGAACTTAGCTTGACAAATTGCAACCAAATA
AGGAAGTTGCCTCTCTCTATTCAAACTTCCAAGAACATCAAAGTAATAAGAGGAGCGTCG
GATTGGTGGAGCCAATTGGAGTGGGATGACGATAGCTCCAAGTCAAAGTTAGAGCATTGC
TTCCTACCACTTTAA

Peptide Sequence

PEP ID

XP_016500413.1
PEP Infomation

PREDICTED: disease resistance protein At4g27190-like isoform X5 [Nicotiana tabacum]
Sequence

MRTDAEIKVYTFDEDESWQLFVKNARDNANLEHIQPFAKKIAKQCDGLPLAITVIAASMR
GQERVELWKGTLESLRMSKPNKDFENMVYKVIKWSFDSLESQGIELSSEQTSKHVNKRGG
DIQNCFLYCSLYPVAVSTDDLIHCWWTEGLLGEHDTYEEAYNRGITVIESLKDACLLETH
GGLDSVKMHAMVRNVAIWIANSLGDEHNSLIQAGIGLTHIKIMSVSVKRISFVSNKIERL
PDSFKKCPKTTTLLLQDNSPLQIIPHELFQAFPALRVLNLSGTGIRALPSSINSLSQLNA
LILQNCGWLTELPPIGDLCNLQLLDCDNTKLNCLPQGLDKLTNLRLLNMPATYLKSIGQG
ILPKLSSIEMLNMLDTTYFQPPRWYLTPHPYPGTLSNVRKEGDTLLGSSTFDELSYLPNL
TSLFVKLDSSSILNRDHTWMSRLERFRIEVGVGPMEAKFNKSTRMIGVSQCQIFSKGELS
GMLQFASDLYLIKCMGLRKLIAYNSFDGLKSLHIVNCSCDFKPVEEGNEHFDPLPNLKEG
NEHFDPLPNLEYLRLGSLFNLKSVSEFGHFLGTRFSKLRQLEMAVCQSLTCLFNVGGAFS
VPKHLEDIGISNCRMTLVNSEVPRVRELLLENCPSLGTLGEPENTWEHLEELSLTNCNQI
RKLPLSIQTSKNIKVIRGASDWWSQLEWDDDSSKSKLEHCFLPL

Transcript Sequence

Gene sequence data has not been registered.